AT3G61110 (ARS27A, RS27A)


Aliases : ARS27A, RS27A

Description : ribosomal protein S27


Gene families : OG_01_0001943 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001943_tree ,
OG_02_0003066 (LandPlants) Phylogenetic Tree(s): OG_02_0003066_tree ,
OG_03_0004957 (SeedPlants) Phylogenetic Tree(s): OG_03_0004957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G61110
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
GSVIVT01032964001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
LOC_Os04g27860.1 No alias component RPS27 of SSU proteome 0.05 Archaeplastida
MA_54625g0010 No alias component RPS27 of SSU proteome 0.11 Archaeplastida
MA_87055g0010 No alias component RPS27 of SSU proteome 0.05 Archaeplastida
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.16 Archaeplastida
Pp3c18_2100V3.1 No alias ribosomal protein S27 0.03 Archaeplastida
Pp3c1_15840V3.1 No alias ribosomal protein S27 0.22 Archaeplastida
Pp3c21_21540V3.1 No alias ribosomal protein S27 0.08 Archaeplastida
Pp3c22_18310V3.1 No alias ribosomal protein S27 0.16 Archaeplastida
Pp3c2_20540V3.1 No alias ribosomal protein S27 0.14 Archaeplastida
Smo163947 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Solyc01g008080.3.1 No alias component RPS27 of SSU proteome 0.06 Archaeplastida
Zm00001e012048_P001 No alias component RPS27 of SSU proteome 0.09 Archaeplastida
Zm00001e024704_P001 No alias component RPS27 of SSU proteome 0.13 Archaeplastida
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 LandPlants
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 LandPlants
LOC_Os04g27860.1 No alias component RPS27 of SSU proteome 0.05 LandPlants
MA_54625g0010 No alias component RPS27 of SSU proteome 0.11 LandPlants
MA_87055g0010 No alias component RPS27 of SSU proteome 0.05 LandPlants
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.16 LandPlants
Pp3c1_15840V3.1 No alias ribosomal protein S27 0.2 LandPlants
Pp3c21_21540V3.1 No alias ribosomal protein S27 0.08 LandPlants
Pp3c22_18310V3.1 No alias ribosomal protein S27 0.16 LandPlants
Pp3c2_20540V3.1 No alias ribosomal protein S27 0.14 LandPlants
Smo163947 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 LandPlants
Solyc01g008080.3.1 No alias component RPS27 of SSU proteome 0.04 LandPlants
Zm00001e024704_P001 No alias component RPS27 of SSU proteome 0.11 LandPlants
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 SeedPlants
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 SeedPlants
LOC_Os04g27860.1 No alias component RPS27 of SSU proteome 0.05 SeedPlants
MA_87055g0010 No alias component RPS27 of SSU proteome 0.04 SeedPlants
Solyc01g008080.3.1 No alias component RPS27 of SSU proteome 0.04 SeedPlants
Zm00001e024704_P001 No alias component RPS27 of SSU proteome 0.09 SeedPlants

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Interproscan
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009664 plant-type cell wall organization RCA Interproscan
CC GO:0022626 cytosolic ribosome IDA Interproscan
CC GO:0022627 cytosolic small ribosomal subunit IDA Interproscan
BP GO:0042254 ribosome biogenesis ISS Interproscan
BP GO:0042545 cell wall modification RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!