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  5. Len_g17259

Len_g17259


Description : regulatory protein *(ELMO) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0000860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g17259

Target Alias Description ECC score Gene Family Method Actions
Adi_g011819 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Als_g04212 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20225.t1 Aspi01Gene20225 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Cba_g13119 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Len_g16135 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g23616 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Pnu_g12535 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017589 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g15755 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g15346 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Tin_g22296 No alias regulatory protein *(ELMO) involved in pecTin-dependent... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010471 DUF1068 11 172
No external refs found!