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  5. Len_g16968

Len_g16968


Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex & original description: none


Gene families : OG0004724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16968

Target Alias Description ECC score Gene Family Method Actions
Als_g22107 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Cba_g17101 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g21785 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Lfl_g39489 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Zm00001e023427_P001 Zm00001e023427 PHD finger protein At3g20280 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 271 318
IPR001025 BAH_dom 549 676
No external refs found!