Len_g16958


Description : not classified & original description: none


Gene families : OG0005609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005609_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16958

Target Alias Description ECC score Gene Family Method Actions
Adi_g073903 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g26678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0145.g051648 No alias not classified & original description: CDS=127-2013 0.03 OrthoFinder output from all 47 species
Cba_g14016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G064000.1 Ceric.27G064000 not classified & original description: pacid=50605312... 0.04 OrthoFinder output from all 47 species
Lfl_g29754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!