Len_g16938


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16938

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00028800 evm_27.TU.AmTr_v1... Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
Adi_g067944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08224 SBP1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g28857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23926 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47211.t1 SBP1, Aspi01Gene47211 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G050000.1 SBP1, Ceric.02G050000 not classified & original description: pacid=50584162... 0.04 OrthoFinder output from all 47 species
Dac_g02764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33928 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00571 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05698 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g32420.1 LOC_Os02g32420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g33030.1 LOC_Os04g33030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41580.1 LOC_Os10g41580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20197g0010 SBP1 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
MA_20558g0010 No alias BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_24642g0020 ACN1, AAE7 Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.03 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007211 SBP1 not classified & original description: CDS=385-1452 0.03 OrthoFinder output from all 47 species
Solyc06g061020.3.1 Solyc06g061020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g007120.3.1 Solyc08g007120 Probable BOI-related E3 ubiquitin-protein ligase 2... 0.02 OrthoFinder output from all 47 species
Spa_g06772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23499 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008274_P001 Zm00001e008274 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012302_P001 Zm00001e012302 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 OrthoFinder output from all 47 species
Zm00001e015473_P004 Zm00001e015473 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024199_P001 Zm00001e024199 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033245_P001 Zm00001e033245 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037825_P001 Zm00001e037825 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA

No InterPro domains available for this sequence

No external refs found!