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  5. Len_g16662

Len_g16662


Description : not classified & original description: none


Gene families : OG0000419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16662
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Ala_g03901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G024000.1 Ceric.20G024000 not classified & original description: pacid=50566124... 0.02 OrthoFinder output from all 47 species
Cre02.g091750 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g492750 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g551200 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01033976001 No alias No description available 0.01 OrthoFinder output from all 47 species
Len_g35129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g58811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g16100.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g13204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05208 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g07245 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g36025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32865 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g37437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 86 172
No external refs found!