Len_g16369 (AtIDD12, IDD12)


Aliases : AtIDD12, IDD12

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16369

Target Alias Description ECC score Gene Family Method Actions
Adi_g028548 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g048017 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g108004 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g07600 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g22280 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g60888 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g17401 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene34150.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01019000001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38340.1 IDD5, AtIDD5,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g03355 MGP C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Lfl_g16442 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_26413g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g17643 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g29597 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000780_P001 Zm00001e000780 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!