Len_g16355 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g16355

Target	Alias	Description	ECC score	Gene Family Method
AT2G47000	ATPGP4, PGP4, ABCB4, MDR4	ATP binding cassette subfamily B4	0.03	OrthoFinder output from all 47 species
Aspi01Gene43898.t1	PGP20, Aspi01Gene43898	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_02469	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Lfl_g40621	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10280832g0010	PGP11	ABC transporter B family member 7 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ore_g09833	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19207	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc12g049130.1.1	Solyc12g049130	ABC transporter B family member 22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	443	591
IPR011527	ABC1_TM_dom	100	374
IPR011527	ABC1_TM_dom	759	1029
IPR003439	ABC_transporter-like_ATP-bd	1097	1245

External Links

No external refs found!