AT3G59980


Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG_01_0001682 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001682_tree ,
OG_02_0007870 (LandPlants) Phylogenetic Tree(s): OG_02_0007870_tree ,
OG_03_0009675 (SeedPlants) Phylogenetic Tree(s): OG_03_0009675_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G59980
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000553.11 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Cpa|evm.model.tig00021070.69 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Cre01.g046652 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Cre03.g145967 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
GSVIVT01038277001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
Solyc08g015960.3.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.07 Archaeplastida
GSVIVT01038277001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.06 LandPlants
Solyc08g015960.3.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.07 LandPlants
GSVIVT01038277001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.07 SeedPlants
Solyc08g015960.3.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 111 205
No external refs found!