AMTR_s00011p00238180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.130

Description : RNA biosynthesis.transcriptional activation.TUB transcription factor


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0000341 (SeedPlants) Phylogenetic Tree(s): OG_03_0000341_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00238180
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT2G18280 TLP2, AtTLP2 tubby like protein 2 0.03 Archaeplastida
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os04g59130.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.02 LandPlants
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000007 Tubby_C 30 320
No external refs found!