Len_g15953


Description : not classified & original description: none


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15953

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00255370 AFP3,... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 OrthoFinder output from all 47 species
AT1G69260 AFP1 ABI five binding protein 0.03 OrthoFinder output from all 47 species
AT3G02140 AFP4, TMAC2 AFP2 (ABI five-binding protein 2) family protein 0.04 OrthoFinder output from all 47 species
AT3G29575 AFP3 ABI five binding protein 3 0.04 OrthoFinder output from all 47 species
Aev_g07969 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14024 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Aev_g35216 AFP3 transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Aop_g18858 AFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06877 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08137 AFP4, TMAC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g11550.1 AFP2, LOC_Os03g11550 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
MA_16384g0010 AFP3 transcriptional co-repressor (AFP/NINJA) 0.03 OrthoFinder output from all 47 species
Msp_g20542 AFP3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37601 AFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03969 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Sam_g17298 No alias transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g030633.1.1 AFP3, Solyc02g030633 transcriptional co-repressor (AFP/NINJA) 0.04 OrthoFinder output from all 47 species
Solyc02g066855.1.1 AFP3, Solyc02g066855 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Solyc04g005380.3.1 AFP2, Solyc04g005380 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Solyc05g012210.4.1 AFP2, Solyc05g012210 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Spa_g07383 NINJA not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!