AT3G59220 (PRN, PRN1, ATPIRIN1)

Aliases : PRN, PRN1, ATPIRIN1

Description : pirin

Gene families : OG_01_0001830 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001830_tree ,
OG_02_0002011 (LandPlants) Phylogenetic Tree(s): OG_02_0002011_tree ,
OG_03_0001651 (SeedPlants) Phylogenetic Tree(s): OG_03_0001651_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G59220
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00020p00186610	evm_27.TU.AmTr_v1...	Pirin-like protein OS=Solanum lycopersicum	0.05	Archaeplastida
Cre16.g674964	No alias	Pirin-like protein OS=Solanum lycopersicum	0.01	Archaeplastida
GSVIVT01031671001	No alias	Pirin-like protein OS=Solanum lycopersicum	0.04	Archaeplastida
GSVIVT01037758001	No alias	Pirin-like protein OS=Solanum lycopersicum	0.04	Archaeplastida
Gb_07514	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	Archaeplastida
Gb_16040	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.04	Archaeplastida
Gb_37035	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.04	Archaeplastida
LOC_Os03g62790.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	Archaeplastida
LOC_Os08g27720.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.06	Archaeplastida
MA_10061g0010	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	Archaeplastida
Pp3c2_10320V3.1	No alias	RmlC-like cupins superfamily protein	0.03	Archaeplastida
Smo446995	No alias	Pirin-like protein OS=Solanum lycopersicum	0.03	Archaeplastida
Solyc09g098160.3.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc09g098180.4.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc12g014590.3.1	No alias	Pirin-like protein At1g50590 OS=Arabidopsis thaliana...	0.01	Archaeplastida
Zm00001e004274_P001	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	Archaeplastida
Zm00001e025778_P001	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	Archaeplastida
Zm00001e034512_P001	No alias	Pirin-like protein At1g50590 OS=Arabidopsis thaliana...	0.05	Archaeplastida
AMTR_s00020p00186610	evm_27.TU.AmTr_v1...	Pirin-like protein OS=Solanum lycopersicum	0.04	LandPlants
GSVIVT01031671001	No alias	Pirin-like protein OS=Solanum lycopersicum	0.03	LandPlants
GSVIVT01037758001	No alias	Pirin-like protein OS=Solanum lycopersicum	0.03	LandPlants
Gb_07514	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	LandPlants
Gb_16040	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	LandPlants
Gb_37035	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	LandPlants
LOC_Os03g62790.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	LandPlants
LOC_Os08g27720.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	LandPlants
Pp3c2_10320V3.1	No alias	RmlC-like cupins superfamily protein	0.02	LandPlants
Smo446995	No alias	Pirin-like protein OS=Solanum lycopersicum	0.02	LandPlants
Solyc09g098160.3.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	LandPlants
Solyc09g098180.4.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	LandPlants
Solyc12g014590.3.1	No alias	Pirin-like protein At1g50590 OS=Arabidopsis thaliana...	0.01	LandPlants
Zm00001e004274_P001	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	LandPlants
Zm00001e025778_P001	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.03	LandPlants
Zm00001e034512_P001	No alias	Pirin-like protein At1g50590 OS=Arabidopsis thaliana...	0.03	LandPlants
AMTR_s00020p00186610	evm_27.TU.AmTr_v1...	Pirin-like protein OS=Solanum lycopersicum	0.02	SeedPlants
GSVIVT01031671001	No alias	Pirin-like protein OS=Solanum lycopersicum	0.02	SeedPlants
GSVIVT01037758001	No alias	Pirin-like protein OS=Solanum lycopersicum	0.02	SeedPlants
Gb_16040	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	SeedPlants
Gb_37035	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	SeedPlants
LOC_Os03g62790.1	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	SeedPlants
Solyc12g014590.3.1	No alias	Pirin-like protein At1g50590 OS=Arabidopsis thaliana...	0.01	SeedPlants
Zm00001e004274_P001	No alias	Pirin-like protein OS=Solanum lycopersicum...	0.02	SeedPlants
Zm00001e034512_P001	No alias	Pirin-like protein At1g50590 OS=Arabidopsis thaliana...	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009645	response to low light intensity stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009738	abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009785	blue light signaling pathway	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010244	response to low fluence blue light stimulus by blue low-fluence system	NAS	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transport	RCA	Interproscan
BP	GO:0030522	intracellular receptor signaling pathway	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071483	cellular response to blue light	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008778	Pirin_C_dom	174	281
IPR003829	Pirin_N_dom	38	121

External Links

No external refs found!

AT3G59220 (PRN, PRN1, ATPIRIN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation