Len_g15328 (ARF6)

Aliases : ARF6

Description : ARF-type transcription factor & original description: none

Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g15328

Target	Alias	Description	ECC score	Gene Family Method
Adi_g058500	ARF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08567	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035933	ARF6	not classified & original description: CDS=1-678	0.02	OrthoFinder output from all 47 species
GSVIVT01015035001	ARF19, IAA22, ARF11	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
LOC_Os02g06910.1	ARF6, LOC_Os02g06910	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001668	ARF1	ARF-type transcription factor & original description: CDS=1-2553	0.03	OrthoFinder output from all 47 species
Sam_g12046	No alias	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g10839	ARF1	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010525	ARF_dom	258	341
IPR003340	B3_DNA-bd	132	233

External Links

No external refs found!