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  5. Len_g15239

Len_g15239 (PUB14, ATPUB14)


Aliases : PUB14, ATPUB14

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00052670 PUB13, ATPUB13,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G08315 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene30765.t1 PUB13, ATPUB13,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31832.t1 PUB13, ATPUB13,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034769 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=1-2214 0.03 OrthoFinder output from all 47 species
Cba_g09348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35890 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g36575 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032778001 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula 0.07 OrthoFinder output from all 47 species
LOC_Os01g72600.1 LOC_Os01g72600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g14585 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
MA_133008g0010 PUB14, ATPUB14 U-box domain-containing protein 14 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sam_g11228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023475_P001 Zm00001e023475 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 42 80
No external refs found!