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  5. Len_g15171

Len_g15171 (RecQl3, ATRECQ3)


Aliases : RecQl3, ATRECQ3

Description : not classified & original description: none


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15171

Target Alias Description ECC score Gene Family Method Actions
Mp4g16510.1 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g074600.4.1 MED34, ATRECQ2,... component MED34 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 56 221
IPR032284 RecQ_Zn-bd 378 450
IPR001650 Helicase_C 260 364
No external refs found!