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  5. Len_g15141

Len_g15141


Description : translation initiation factor *(IF-3) & original description: none


Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00042790 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Adi_g025876 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Adi_g102476 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Ala_g01530 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Als_g00759 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Aob_g39107 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Aop_g14624 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0095.g043623 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03761 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Ceric.07G007000.1 Ceric.07G007000 translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g001550 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dcu_g02518 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07464 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
LOC_Os02g55120.1 LOC_Os02g55120 IF-3 translation initiation factor 0.07 OrthoFinder output from all 47 species
Lfl_g37528 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Ore_g07395 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10213 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g00723 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Solyc07g005830.3.1 Solyc07g005830 IF-3 translation initiation factor 0.03 OrthoFinder output from all 47 species
Tin_g29773 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016109_P001 Zm00001e016109 IF-3 translation initiation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR019814 Translation_initiation_fac_3_N 126 194
IPR019815 Translation_initiation_fac_3_C 204 288
No external refs found!