AT3G58560


Description : DNAse I-like superfamily protein


Gene families : OG_01_0003309 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003309_tree ,
OG_02_0004039 (LandPlants) Phylogenetic Tree(s): OG_02_0004039_tree ,
OG_03_0006519 (SeedPlants) Phylogenetic Tree(s): OG_03_0006519_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58560
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000342.20 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 Archaeplastida
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.03 Archaeplastida
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.03 Archaeplastida
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 LandPlants
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.03 LandPlants
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 LandPlants
Mp1g17770.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.01 LandPlants
Pp3c20_980V3.1 No alias DNAse I-like superfamily protein 0.01 LandPlants
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 SeedPlants
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.01 SeedPlants
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.03 SeedPlants
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
MF GO:0016787 hydrolase activity ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 251 583
IPR031615 Zfn-C6H2 71 110
No external refs found!