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AT3G58510


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0002046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002046_tree ,
OG_02_0001832 (LandPlants) Phylogenetic Tree(s): OG_02_0001832_tree ,
OG_03_0001913 (SeedPlants) Phylogenetic Tree(s): OG_03_0001913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58510
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00136740 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G58570 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
LOC_Os06g40020.1 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.03 Archaeplastida
MA_181920g0010 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 Archaeplastida
Mp2g08020.1 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 Archaeplastida
Pp3c14_17810V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c1_40410V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Pp3c2_1920V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Smo267628 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.04 Archaeplastida
Solyc03g052980.3.1 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e011396_P001 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.07 Archaeplastida
Zm00001e011397_P001 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.07 Archaeplastida
AMTR_s00104p00136740 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana 0.03 LandPlants
AT3G58570 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 LandPlants
LOC_Os06g40020.1 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.03 LandPlants
LOC_Os07g10250.1 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 LandPlants
MA_181920g0010 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 LandPlants
Mp2g08020.1 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 LandPlants
Pp3c14_17810V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 LandPlants
Pp3c1_40410V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 LandPlants
Smo267628 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 LandPlants
Solyc03g052980.3.1 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.06 LandPlants
Zm00001e011396_P001 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.07 LandPlants
Zm00001e011397_P001 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.07 LandPlants
AMTR_s00104p00136740 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana 0.03 SeedPlants
AT3G58570 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 SeedPlants
LOC_Os06g40020.1 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.03 SeedPlants
LOC_Os07g10250.1 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 SeedPlants
MA_181920g0010 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 SeedPlants
Solyc03g052980.3.1 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.06 SeedPlants
Zm00001e011396_P001 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.07 SeedPlants
Zm00001e011397_P001 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IDA Interproscan
CC GO:0005777 peroxisome IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 175 354
IPR001650 Helicase_C 389 503
No external refs found!