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  5. Len_g14727

Len_g14727


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14727
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g110200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30578 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33935 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55317 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06180 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008664 No alias not classified & original description: CDS=1-3960 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07653 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44526 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67232 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67893 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75387 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G045700.1 Ceric.08G045700 not classified & original description: pacid=50638513... 0.05 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.03 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.04 OrthoFinder output from all 47 species
Ceric.1Z015700.1 VAC1, ECB2,... not classified & original description: pacid=50604577... 0.03 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g10603 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33753 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01720 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02322 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g37702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47068 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05014 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07395 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13927 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22424 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25213 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000758 No alias not classified & original description: CDS=443-4012 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019766 No alias not classified & original description: CDS=1-3048 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0238.g026585 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2277 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08784 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05155 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1003 1031
IPR002885 Pentatricopeptide_repeat 408 434
IPR002885 Pentatricopeptide_repeat 670 700
IPR002885 Pentatricopeptide_repeat 642 667
IPR002885 Pentatricopeptide_repeat 1037 1064
IPR002885 Pentatricopeptide_repeat 756 776
IPR002885 Pentatricopeptide_repeat 898 946
IPR002885 Pentatricopeptide_repeat 317 355
IPR002885 Pentatricopeptide_repeat 782 828
IPR002885 Pentatricopeptide_repeat 216 262
No external refs found!