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  5. Len_g14587

Len_g14587


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14587

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00139140 SAMDC4, BUD2,... Polyamine... 0.03 OrthoFinder output from all 47 species
Adi_g068375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03505 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02769 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13328 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38466 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 417 758
IPR001985 S-AdoMet_decarboxylase 21 347
IPR022644 De-COase2_N 425 657
No external refs found!