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  5. Len_g14363

Len_g14363


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14363

Target Alias Description ECC score Gene Family Method Actions
AT1G19835 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
AT4G36120 No alias Plant protein of unknown function (DUF869) 0.01 OrthoFinder output from all 47 species
Adi_g039275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03819 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15283 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16192 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02379 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13596 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044590 No alias not classified & original description: CDS=279-3875 0.03 OrthoFinder output from all 47 species
Ceric.31G007400.1 Ceric.31G007400 not classified & original description: pacid=50573664... 0.03 OrthoFinder output from all 47 species
Ceric.31G017100.1 Ceric.31G017100 microtubule assembly factor *(TCS1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03196 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16934 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23963 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009871001 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022085001 No alias Vesicle trafficking.target membrane tethering.VETH... 0.02 OrthoFinder output from all 47 species
GSVIVT01022086001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_02939 No alias Exocyst complex recruiting factor (VETH) 0.04 OrthoFinder output from all 47 species
Gb_23430 No alias Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
LOC_Os10g07480.1 LOC_Os10g07480 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g56684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28076 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429332g0010 No alias Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
Mp1g20920.1 No alias Exocyst complex recruiting factor (VETH) 0.07 OrthoFinder output from all 47 species
Msp_g14741 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15032 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19866 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07128 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19189 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02317 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11825 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g07064 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09434 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03259 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08462 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g11350 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g18883 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32112 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021755 No alias not classified & original description: CDS=1227-4859 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021772 No alias microtubule assembly factor *(TCS1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g07467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16310 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo134290 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g107890.3.1 Solyc01g107890 Filament-like plant protein 7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc02g093160.3.1 Solyc02g093160 Filament-like plant protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12826 No alias microtubule assembly factor *(TCS1) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g15316 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07571 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28404 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038583_P001 Zm00001e038583 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 74 952
No external refs found!