AT3G57800


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000051 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000051_tree ,
OG_02_0000091 (LandPlants) Phylogenetic Tree(s): OG_02_0000091_tree ,
OG_03_0010863 (SeedPlants) Phylogenetic Tree(s): OG_03_0010863_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57800
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
AMTR_s00133p00027110 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
AT4G34530 CIB1 cryptochrome-interacting basic-helix-loop-helix 1 0.04 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01023585001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01023783001 No alias External stimuli response.light.UV-A/blue... 0.06 Archaeplastida
GSVIVT01033356001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_12493 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os01g67480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g68700.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os06g41060.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
LOC_Os09g31300.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c18_6880V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo443113 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc09g057710.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc09g097870.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e009823_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e018857_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e021418_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030519_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e034605_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 LandPlants
AMTR_s00133p00027110 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 LandPlants
AT1G10120 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.02 LandPlants
GSVIVT01021032001 No alias External stimuli response.light.UV-A/blue... 0.03 LandPlants
GSVIVT01023783001 No alias External stimuli response.light.UV-A/blue... 0.06 LandPlants
Gb_12493 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants
LOC_Os06g41060.1 No alias transcription factor (bHLH) 0.07 LandPlants
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants
Solyc09g057710.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 LandPlants
Solyc09g097870.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Zm00001e003701_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 LandPlants
Zm00001e018857_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
Zm00001e021418_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e030519_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 LandPlants
Zm00001e034605_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 LandPlants
LOC_Os06g41060.1 No alias transcription factor (bHLH) 0.07 SeedPlants
Zm00001e030519_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 214 245
No external refs found!