Len_g13952 (UBP13)

Aliases : UBP13

Description : not classified & original description: none

Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g13952

Target	Alias	Description	ECC score	Gene Family Method
Ala_g06394	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29880	UBP12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene23681.t1	Aspi01Gene23681	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.15G071100.1	UBP12, Ceric.15G071100	not classified & original description: pacid=50640759...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021281.14	No alias	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g27627	UBP12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g23057	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g18112	UBP12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_35991	UBP12	Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_10436921g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_17762g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_6934376g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Ore_g43540	UBP12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740	UBP12	not classified & original description: CDS=294-7754	0.04	OrthoFinder output from all 47 species
Sam_g27884	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo447032	UBP12	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Spa_g09112	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021905	DUF3517	2125	2407
IPR001394	Peptidase_C19_UCH	1569	1933

External Links

No external refs found!

Len_g13952 (UBP13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation