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  5. Len_g13942

Len_g13942


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13942
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00044260 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT2G43060 IBH1 ILI1 binding bHLH 1 0.02 OrthoFinder output from all 47 species
Ala_g32990 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13089 IBH1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09658 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g19780.1 LOC_Os03g19780 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g41564 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041841_P001 Zm00001e041841 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!