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  5. Len_g13938

Len_g13938 (PUM7, APUM7)


Aliases : PUM7, APUM7

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13938

Target Alias Description ECC score Gene Family Method Actions
Als_g63300 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.04 OrthoFinder output from all 47 species
Ceric.39G043300.1 PUM7, APUM7,... not classified & original description: pacid=50583488... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020878.26 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
MA_63194g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g04974 PUM7, APUM7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44911 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63452 PUM7, APUM7 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 559 590
IPR001313 Pumilio_RNA-bd_rpt 635 665
IPR001313 Pumilio_RNA-bd_rpt 742 776
IPR001313 Pumilio_RNA-bd_rpt 600 624
IPR001313 Pumilio_RNA-bd_rpt 523 557
IPR001313 Pumilio_RNA-bd_rpt 783 798
IPR001313 Pumilio_RNA-bd_rpt 670 703
IPR001313 Pumilio_RNA-bd_rpt 709 725
No external refs found!