Len_g13874 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g13874

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00160270	WRKY75,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00128140	WRKY42,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.03	OrthoFinder output from all 47 species
AT2G04880	WRKY1, ZAP1, ATWRKY1	zinc-dependent activator protein-1	0.02	OrthoFinder output from all 47 species
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.02	OrthoFinder output from all 47 species
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.03	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.03	OrthoFinder output from all 47 species
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.03	OrthoFinder output from all 47 species
Adi_g029222	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08045	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g25778	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g24152	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39118	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39171	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g39192	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g56491	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g56728	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18287	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g24618	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25566	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27651.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene29744.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene68493.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g22410	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.04G004900.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.09G081700.1	ATWRKY50,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.1Z119500.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G073200.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g08284	WRKY26	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g32055	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g32126	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g51139	WRKY9, ATWRKY9	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g18623	WRKY26	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31448	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g03251	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03867	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13568	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18481	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26902	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g31501	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021397001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01033063001	WRKY75, ATWRKY75	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01035884001	WRKY18, ATWRKY18	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_02625	WRKY75, ATWRKY75	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g40430.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g45450.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g39720.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os05g49100.1	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g50610.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os09g30400.3	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Len_g10997	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_120697g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_164675g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_20468g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_212937g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_310991g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_83250g0010	WRKY6, ATWRKY6	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp3g17660.1	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Msp_g19074	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g26331	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g04900	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g05804	WRKY26	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19197	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g10492	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32579	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023220	WRKY4	WRKY-type transcription factor & original description: CDS=1-1263	0.02	OrthoFinder output from all 47 species
Solyc01g095630.3.1	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc03g007380.2.1	AtWRKY41,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g066370.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Solyc10g009550.3.1	ATWRKY30,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g05540	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g19666	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g30009	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g14392	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e019418_P001	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
Zm00001e019448_P001	WRKY38,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e019977_P001	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e020279_P001	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e022331_P001	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e035859_P001	WRKY46,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e038239_P001	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e040369_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e042185_P001	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	299	337

External Links

No external refs found!

Len_g13874 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation