AT3G57350

Description : Nucleoporin interacting component (Nup93/Nic96-like) family protein

Gene families : OG_01_0004324 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004324_tree ,
OG_02_0005232 (LandPlants) Phylogenetic Tree(s): OG_02_0005232_tree ,
OG_03_0005542 (SeedPlants) Phylogenetic Tree(s): OG_03_0005542_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G57350
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
Gb_32484	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.04	Archaeplastida
LOC_Os03g22690.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.03	Archaeplastida
Smo177656	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.02	Archaeplastida
Gb_32484	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.04	LandPlants
LOC_Os03g22690.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.03	LandPlants
AMTR_s00107p00047780	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.01	SeedPlants
Gb_32484	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.04	SeedPlants
LOC_Os03g22690.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.03	SeedPlants
Solyc04g016240.3.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.02	SeedPlants
Zm00001e001657_P002	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005635	nuclear envelope	IDA	Interproscan
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007231	Nucleoporin_int_Nup93/Nic96	243	821

External Links

No external refs found!