Len_g13480


Description : not classified & original description: none


Gene families : OG0005152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13480
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00053870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G51230 No alias BEST Arabidopsis thaliana protein match is:... 0.02 OrthoFinder output from all 47 species
Als_g51690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0127.g048704 No alias not classified & original description: CDS=134-2074 0.02 OrthoFinder output from all 47 species
Ceric.11G031400.1 Ceric.11G031400 not classified & original description: pacid=50595031... 0.05 OrthoFinder output from all 47 species
Ceric.1Z073500.1 Ceric.1Z073500 not classified & original description: pacid=50586247... 0.04 OrthoFinder output from all 47 species
Dcu_g03833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018782001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os10g42660.1 LOC_Os10g42660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_27772g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_954115g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g15450.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022209 No alias not classified & original description: CDS=13-852 0.03 OrthoFinder output from all 47 species
Solyc02g062170.3.1 Solyc02g062170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g083890.4.1 Solyc02g083890 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g41301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002472_P001 Zm00001e002472 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012997_P002 Zm00001e012997 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!