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  5. Len_g13457

Len_g13457 (NPSN12, ATNPSN12)


Aliases : NPSN12, ATNPSN12

Description : Qb-type NPSN-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13457

Target Alias Description ECC score Gene Family Method Actions
AT2G35190 NSPN11, ATNPSN11, NPSN11 novel plant snare 11 0.02 OrthoFinder output from all 47 species
Ala_g03833 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g26661 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.23G076100.1 NPSN13,... Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.35G009000.1 NPSN13,... Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cre07.g342050 NSPN11, ATNPSN11, NPSN11 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
GSVIVT01013276001 NSPN11, ATNPSN11, NPSN11 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
LOC_Os07g44350.1 NPSN13,... NPSN group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Mp2g03810.1 NPSN13, ATNPSN13 NPSN group Qb-type SNARE protein 0.02 OrthoFinder output from all 47 species
Nbi_g05218 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Nbi_g19000 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Spa_g12698 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Spa_g15091 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Zm00001e035664_P001 NPSN13,... NPSN group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!