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  5. Len_g13142

Len_g13142 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00044730 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.03 OrthoFinder output from all 47 species
AT2G29050 RBL1, ATRBL1 RHOMBOID-like 1 0.01 OrthoFinder output from all 47 species
Adi_g017308 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02072 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12857 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g05092 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0183.g056478 RBL1, ATRBL1 protease *(RBL) & original description: CDS=777-1763 0.03 OrthoFinder output from all 47 species
Ceric.09G095000.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50588469... 0.03 OrthoFinder output from all 47 species
Ceric.11G049000.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50596589... 0.03 OrthoFinder output from all 47 species
Ceric.13G018300.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50636147... 0.03 OrthoFinder output from all 47 species
Dac_g20994 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06776 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017301001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01034160001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05430.1 RBL1, ATRBL1,... protease (RBL) 0.02 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Lfl_g06970 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12850 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018958 RBL1, ATRBL1 protease *(RBL) & original description: CDS=1-1146 0.03 OrthoFinder output from all 47 species
Sam_g18257 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07675 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11810 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57345 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02797 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15295 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000111_P001 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Zm00001e024265_P001 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 111 252
No external refs found!