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  5. Len_g13042

Len_g13042


Description : not classified & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13042
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene22309.t1 Aspi01Gene22309 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0412.g068557 No alias subfamily ABCG transporter & original description: CDS=1-2001 0.03 OrthoFinder output from all 47 species
Ceric.34G074000.1 Ceric.34G074000 not classified & original description: pacid=50622980... 0.03 OrthoFinder output from all 47 species
Dac_g01759 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12680 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19285 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022526001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Ppi_g13835 ABCG26, WBC27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57469 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g006960.3.1 Solyc04g006960 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc08g005580.3.1 ABCG14, Solyc08g005580 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 109 261
IPR013525 ABC_2_trans 462 671
No external refs found!