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  5. Len_g13038

Len_g13038


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0002813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13038

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00171720 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
AT2G23740 No alias nucleic acid binding;sequence-specific DNA binding... 0.05 OrthoFinder output from all 47 species
Adi_g018566 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Adi_g102347 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Als_g07117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19192 No alias class-V histone methyltransferase *(Suv) & original... 0.02 OrthoFinder output from all 47 species
Als_g23979 No alias EC_2.1 transferase transferring one-carbon group &... 0.1 OrthoFinder output from all 47 species
Als_g63638 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20128.t1 Aspi01Gene20128 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene24215.t1 Aspi01Gene24215 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036615 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Ceric.01G055800.1 Ceric.01G055800 EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Dcu_g04992 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01019046001 No alias Chromatin organisation.histone modifications.histone... 0.09 OrthoFinder output from all 47 species
Gb_09467 No alias class V/Su(var) histone methyltransferase component of... 0.05 OrthoFinder output from all 47 species
LOC_Os02g47890.1 LOC_Os02g47890 Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os02g47900.1 LOC_Os02g47900 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Lfl_g03507 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
MA_10427485g0010 No alias Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10428046g0010 No alias class V/Su(var) histone methyltransferase component of... 0.07 OrthoFinder output from all 47 species
MA_10428226g0010 No alias class V/Su(var) histone methyltransferase component of... 0.05 OrthoFinder output from all 47 species
Mp7g11940.1 No alias class V/Su(var) histone methyltransferase component of... 0.09 OrthoFinder output from all 47 species
Msp_g24543 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ore_g28925 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020752 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Sam_g29232 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Smo123777 No alias Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g089970.3.1 Solyc02g089970 class V/Su(var) histone methyltransferase component of... 0.05 OrthoFinder output from all 47 species
Tin_g08153 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Zm00001e023341_P001 Zm00001e023341 class V/Su(var) histone methyltransferase component of... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030623 U5 snRNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 1126 1260
IPR001214 SET_dom 1279 1397
IPR040689 SUVR5_Znf-C2H2_3rpt 887 914
No external refs found!