Len_g12955


Description : not classified & original description: none


Gene families : OG0003804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12955

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00038450 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.05 OrthoFinder output from all 47 species
AT5G27970 No alias ARM repeat superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g12532 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g05143 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g29508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60185.t1 Aspi01Gene60185 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g17539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre13.g575250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g23620 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g00991 No alias subgroup ERF-X transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021873001 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
Gb_33881 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.05 OrthoFinder output from all 47 species
LOC_Os01g56590.1 LOC_Os01g56590 Brefeldin A-inhibited guanine nucleotide-exchange... 0.02 OrthoFinder output from all 47 species
Lfl_g02462 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10436382g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_734099g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g05240.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g37399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo443671 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.03 OrthoFinder output from all 47 species
Solyc09g018340.2.1 Solyc09g018340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g018370.4.1 Solyc09g018370 Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
Spa_g21400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019674_P001 Zm00001e019674 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019681_P002 Zm00001e019681 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR032629 DCB_dom 3 170
IPR032817 Mon2_C 906 1174
IPR032817 Mon2_C 1392 1650
IPR015403 Mon2/Sec7/BIG1-like_HDS 828 900
IPR032691 Mon2/Sec7/BIG1-like_HUS 233 389
No external refs found!