Len_g12567 (AL2)

Aliases : AL2

Description : methylation reader Alfin of PRC1 complex & original description: none

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g12567

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00200570	AL5,...	RNA biosynthesis.transcriptional activation.Alfin-like...	0.03	OrthoFinder output from all 47 species
AT1G14510	AL7	alfin-like 7	0.03	OrthoFinder output from all 47 species
AT3G42790	AL3	alfin-like 3	0.03	OrthoFinder output from all 47 species
Adi_g018613	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Adi_g105203	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Adi_g112255	AL5	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Als_g04779	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Aop_g49023	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0244.g059922	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Gb_22969	AL5	Alfin-like transcription factor	0.01	OrthoFinder output from all 47 species
LOC_Os11g14010.1	AL7, LOC_Os11g14010	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Msp_g05555	AL1	methylation reader Alfin of PRC1 complex & original...	0.01	OrthoFinder output from all 47 species
Nbi_g04136	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Pir_g12876	AL1	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Ppi_g04259	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ppi_g49107	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019418	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Sam_g19302	No alias	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Solyc10g085180.2.1	AL1, Solyc10g085180	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e028587_P002	AL4, Zm00001e028587	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	202	249
IPR021998	Alfin_N	21	146

External Links

No external refs found!

Len_g12567 (AL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation