Aliases : TIC40, ATTIC40, PDE120
Description : component *(Tic40) of inner envelope TIC translocation system & original description: none
Gene families : OG0004334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004334_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Len_g12504 | |
Cluster | HCCA: Cluster_43 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00175860 | TIC40, ATTIC40,... | Protein translocation.chloroplast.inner envelope TIC... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.35G014600.1 | TIC40, ATTIC40,... | component *(Tic40) of inner envelope TIC translocation... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g508000 | TIC40, ATTIC40, PDE120 | Protein translocation.chloroplast.inner envelope TIC... | 0.04 | OrthoFinder output from all 47 species | |
MA_10433034g0010 | TIC40, ATTIC40, PDE120 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g00830.1 | TIC40, ATTIC40, PDE120 | component Tic40 of inner envelope TIC translocation system | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g01024 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g25748 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g13431 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0187.g025125 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g020300.2.1 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.05 | OrthoFinder output from all 47 species | |
Spa_g08190 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e008048_P001 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.09 | OrthoFinder output from all 47 species | |
Zm00001e040911_P002 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR041243 | STI1/HOP_DP | 375 | 426 |
No external refs found! |