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  5. Len_g12482

Len_g12482


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12482
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.03 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.04 OrthoFinder output from all 47 species
Ceric.39G058300.1 Ceric.39G058300 not classified & original description: pacid=50582561... 0.03 OrthoFinder output from all 47 species
Dac_g33413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017150 No alias not classified & original description: CDS=1-2094 0.05 OrthoFinder output from all 47 species
Sam_g09085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 237 281
IPR033443 PPR_long 510 624
IPR002885 Pentatricopeptide_repeat 206 232
IPR002885 Pentatricopeptide_repeat 167 195
No external refs found!