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  5. Len_g12464

Len_g12464


Description : not classified & original description: none


Gene families : OG0000323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12464
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Aev_g13345 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ala_g25817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28405 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aop_g01710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07315 No alias ketosphinganine reductase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08244.t1 Aspi01Gene08244 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69504.t1 Aspi01Gene69504 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g18539 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g55474 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Cre17.g702750 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g09776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12120 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Dde_g06710 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ehy_g14251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06706 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_18260 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47350.1 LOC_Os02g47350 ketosphinganine reductase 0.02 OrthoFinder output from all 47 species
Len_g23290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_115712g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_29607g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9332825g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g25802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22616 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ppi_g62734 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Spa_g13563 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Spa_g17382 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Spa_g28867 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Tin_g07946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15134 No alias EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 38 237
No external refs found!