AT3G56140


Description : Protein of unknown function (DUF399 and DUF3411)


Gene families : OG_01_0005576 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005576_tree ,
OG_02_0004310 (LandPlants) Phylogenetic Tree(s): OG_02_0004310_tree ,
OG_03_0004818 (SeedPlants) Phylogenetic Tree(s): OG_03_0004818_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56140
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g39680.1 No alias component SNX2 of Retromer protein recycling complex 0.06 Archaeplastida
LOC_Os05g39680.1 No alias component SNX2 of Retromer protein recycling complex 0.06 LandPlants
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 LandPlants
LOC_Os05g39680.1 No alias component SNX2 of Retromer protein recycling complex 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009543 chloroplast thylakoid lumen ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007314 Cofac_haem-bd_dom 152 372
IPR021825 RETICULATA-related 479 663
No external refs found!