AT3G56140

Description : Protein of unknown function (DUF399 and DUF3411)

Gene families : OG_01_0005576 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005576_tree ,
OG_02_0004310 (LandPlants) Phylogenetic Tree(s): OG_02_0004310_tree ,
OG_03_0004818 (SeedPlants) Phylogenetic Tree(s): OG_03_0004818_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G56140
Cluster	HCCA: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os05g39680.1	No alias	component SNX2 of Retromer protein recycling complex	0.06	Archaeplastida
LOC_Os05g39680.1	No alias	component SNX2 of Retromer protein recycling complex	0.06	LandPlants
Smo177305	No alias	Protein RETICULATA-RELATED 5, chloroplastic...	0.02	LandPlants
LOC_Os05g39680.1	No alias	component SNX2 of Retromer protein recycling complex	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009543	chloroplast thylakoid lumen	ISS	Interproscan
CC	GO:0031977	thylakoid lumen	None	Extended
CC	GO:0031978	plastid thylakoid lumen	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007314	Cofac_haem-bd_dom	152	372
IPR021825	RETICULATA-related	479	663

External Links

No external refs found!