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  5. Len_g12290

Len_g12290 (CSY2)


Aliases : CSY2

Description : not classified & original description: none


Gene families : OG0002699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12290
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT2G42790 CSY3 citrate synthase 3 0.03 OrthoFinder output from all 47 species
AT3G58740 CSY1 citrate synthase 1 0.03 OrthoFinder output from all 47 species
Als_g38424 CSY2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14584 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G069400.1 CSY3, Ceric.01G069400 citrate synthase & original description: pacid=50592334... 0.03 OrthoFinder output from all 47 species
Dcu_g19035 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037027001 PGP9 ABC transporter B family member 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_10435830g0020 CSY2 citrate synthase 0.02 OrthoFinder output from all 47 species
MA_6585793g0010 CSY2 citrate synthase 0.02 OrthoFinder output from all 47 species
MA_7704g0010 CSY3 Citrate synthase, glyoxysomal OS=Cucurbita maxima... 0.03 OrthoFinder output from all 47 species
Smo411022 CSY2 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Solyc07g055840.3.1 CSY3, Solyc07g055840 citrate synthase 0.02 OrthoFinder output from all 47 species
Zm00001e014403_P005 CSY3, Zm00001e014403 citrate synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 104 167
No external refs found!