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  5. Len_g12239

Len_g12239 (HOS15)


Aliases : HOS15

Description : component *(HOS15) of HDA9-PWR deacetylation complex & original description: none


Gene families : OG0003691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12239

Target Alias Description ECC score Gene Family Method Actions
Aev_g07238 HOS15 component *(HOS15) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Cba_g38867 HOS15 component *(HOS15) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Mp6g00250.1 HOS15 component HOS15 of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species
Pnu_g17462 HOS15 component *(HOS15) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Sam_g39864 No alias component *(HOS15) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e008690_P001 HOS15, Zm00001e008690 component HOS15 of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 275 308
IPR001680 WD40_repeat 588 623
IPR001680 WD40_repeat 373 408
IPR001680 WD40_repeat 454 491
IPR001680 WD40_repeat 549 584
IPR001680 WD40_repeat 497 542
IPR001680 WD40_repeat 328 367
IPR006594 LisH 8 33
No external refs found!