Len_g12155


Description : nucleocytoplasmic transport karyopherin *(XPO4) & original description: none


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00074620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
MA_16344g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08548 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species
Zm00001e004578_P001 Zm00001e004578 XPO4 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR014877 XPO1_C_dom 965 1035
No external refs found!