Len_g11985

Description : component *(eS1) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g11985

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00271660	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
AT3G04840	No alias	Ribosomal protein S3Ae	0.03	OrthoFinder output from all 47 species
AT4G34670	No alias	Ribosomal protein S3Ae	0.05	OrthoFinder output from all 47 species
Azfi_s0087.g042272	No alias	component *(eS1) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ceric.10G049700.1	Ceric.10G049700	component *(eS1) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ceric.32G043000.1	Ceric.32G043000	component *(eS1) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cre13.g568650	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01021836001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Gb_02289	No alias	component RPS3a of SSU proteome	0.03	OrthoFinder output from all 47 species
MA_124901g0010	No alias	component RPS3a of SSU proteome	0.02	OrthoFinder output from all 47 species
MA_31004g0010	No alias	component RPS3a of SSU proteome	0.03	OrthoFinder output from all 47 species
Pir_g08877	No alias	component *(eS1) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Solyc06g072490.3.1	Solyc06g072490	component RPS3a of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g05776	No alias	component *(eS1) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Tin_g01747	No alias	component *(eS1) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e038777_P001	Zm00001e038777	component RPS3a of SSU proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001593	Ribosomal_S3Ae	16	221

External Links

No external refs found!

Len_g11985

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation