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  5. Len_g11774

Len_g11774


Description : component *(bL34c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0007282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11774
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00119000 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Aev_g01858 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g01552 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cre01.g030050 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dde_g49422 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_28936 No alias component psRPL34 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os01g59060.1 LOC_Os01g59060 component psRPL34 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Len_g11773 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Mp1g06530.1 No alias component psRPL34 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Ppi_g61745 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010804 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g056780.3.1 Solyc01g056780 component psRPL34 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000271 Ribosomal_L34 93 128
No external refs found!