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  5. Len_g11733

Len_g11733 (PAC1)


Aliases : PAC1

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0004222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11733

Target Alias Description ECC score Gene Family Method Actions
Cre10.g418100 PAC1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Dde_g00383 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01026133001 PAC1 No description available 0.03 OrthoFinder output from all 47 species
Mp1g16770.1 PAC1 component alpha type-3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Nbi_g03431 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Tin_g00589 PAC1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e030110_P001 PAC1, Zm00001e030110 component alpha type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 2 150
No external refs found!