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  5. Len_g11651

Len_g11651


Description : not classified & original description: none


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11651
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.04 OrthoFinder output from all 47 species
Adi_g048192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aev_g02541 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g01529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06534.t1 Aspi01Gene06534 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03217 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.05 OrthoFinder output from all 47 species
Ceric.29G029100.1 Ceric.29G029100 not classified & original description: pacid=50624979... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021617.18 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02819 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g11697 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032197001 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.1 OrthoFinder output from all 47 species
Lfl_g35960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_76219g0030 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g12361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20049 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g38821 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pnu_g08153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012586 No alias not classified & original description: CDS=235-2685 0.05 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35505 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo71514 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc01g087750.4.1 Solyc01g087750 Protein RETICULATA-RELATED 4, chloroplastic... 0.09 OrthoFinder output from all 47 species
Solyc06g050620.3.1 Solyc06g050620 Protein RETICULATA-RELATED 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g07578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.05 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e027293_P001 Zm00001e027293 Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 189 366
No external refs found!