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  5. Len_g11558

Len_g11558


Description : E3 ubiquitin ligase component *(HRD1) of ER-associated protein degradation (ERAD) machinery & original description: none


Gene families : OG0003518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11558

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.23 No alias Protein degradation.ER-associated protein degradation... 0.01 OrthoFinder output from all 47 species
Dac_g16316 No alias E3 ubiquitin ligase component *(HRD1) of ER-associated... 0.03 OrthoFinder output from all 47 species
Solyc03g096930.4.1 Solyc03g096930 ubiquitin ligase component HRD1 of ER-associated protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 291 330
No external refs found!