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  5. AT3G55340

AT3G55340 (PHIP1)


Aliases : PHIP1

Description : phragmoplastin interacting protein 1


Gene families : OG_01_0004733 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004733_tree ,
OG_02_0005065 (LandPlants) Phylogenetic Tree(s): OG_02_0005065_tree ,
OG_03_0005356 (SeedPlants) Phylogenetic Tree(s): OG_03_0005356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55340
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000441.24 No alias Nucleolin 1 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cre10.g466450 No alias No description available 0.11 Archaeplastida
Gb_35169 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g03140.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g02400.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Mp3g24090.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.09 Archaeplastida
Pp3c14_1940V3.1 No alias phragmoplastin interacting protein 1 0.05 Archaeplastida
Solyc06g018110.3.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e029603_P002 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_35169 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os03g03140.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os05g02400.1 No alias no hits & (original description: none) 0.1 LandPlants
Mp3g24090.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.09 LandPlants
Pp3c14_1940V3.1 No alias phragmoplastin interacting protein 1 0.05 LandPlants
Solyc06g018110.3.1 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e029603_P002 No alias no hits & (original description: none) 0.04 LandPlants
Gb_35169 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os03g03140.1 No alias no hits & (original description: none) 0.04 SeedPlants
LOC_Os05g02400.1 No alias no hits & (original description: none) 0.09 SeedPlants
Solyc06g018110.3.1 No alias no hits & (original description: none) 0.08 SeedPlants
Zm00001e029603_P002 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0003729 mRNA binding IPI Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IDA Interproscan
CC GO:0019898 extrinsic component of membrane IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 395 411
IPR001878 Znf_CCHC 574 591
IPR001878 Znf_CCHC 479 495
IPR000504 RRM_dom 163 230
IPR000504 RRM_dom 264 332
No external refs found!