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  5. Len_g11401

Len_g11401 (TCP5)


Aliases : TCP5

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11401

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00357p00009370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37950 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G064100.1 ATTCP24, TCP24,... TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Gb_30049 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Gb_38377 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_15254g0010 TCP13, TFPD, PTF1 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
MA_16704g0010 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_49143g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_547683g0010 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Pnu_g20245 TCP3 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g045030.2.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Spa_g38674 TCP2 TCP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 141 253
No external refs found!