Smo110508 (PACid_15408039)


Aliases : PACid_15408039

Description : 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated Encodes ATB2. ATB2 FUNCTIONS IN: oxidoreductase activity INVOLVED IN: response to cadmium ion EXPRESSED IN: 23 plant structures EXPRESSED DURING: 14 growth stages CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471) BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1) Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650 Bacteria - 20319 Metazoa - 1822 Fungi - 2308 Plants - 1286 Viruses - 0 Other Eukaryotes - 4334 (source: NCBI BLink). & (loc_os04g26910.1 : 426.0


Gene families : OG_01_0000163 (Gene family) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo110508
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G10810 No alias NAD(P)-linked oxidoreductase superfamily protein 0.02 Gene family
AT1G60730 No alias NAD(P)-linked oxidoreductase superfamily protein 0.02 Gene family
GSVIVT01018047001 No alias 17.2.3 hormone... 0.03 Gene family
GSVIVT01021808001 No alias 17.2.3 hormone... 0.02 Gene family
GSVIVT01031651001 No alias 17.2.3 hormone... 0.02 Gene family
LOC_Os04g26870 Os04g0337500 17.2.3 hormone... 0.02 Gene family
LOC_Os04g26920 Os04g0338100 17.2.3 hormone... 0.03 Gene family
LOC_Os04g27060 Os04g0339400 17.2.3 hormone... 0.02 Gene family
MA_10426629g0010 No alias 17.2.3 hormone... 0.01 Gene family
MA_10428240g0010 No alias 17.2.3 hormone... 0.02 Gene family
MA_174220g0010 No alias 17.2.3 hormone... 0.03 Gene family
MA_175913g0010 No alias 17.2.3 hormone... 0.01 Gene family
MA_40561g0010 No alias 17.2.3 hormone... 0.03 Gene family
MA_425689g0010 No alias 17.2.3 hormone... 0.03 Gene family
MA_6145256g0010 No alias 17.2.3 hormone... 0.02 Gene family
Smo172677 PACid_15413526 17.2.3 hormone... 0.02 Gene family
Smo172992 PACid_15415852 17.2.3 hormone... 0.03 Gene family
Smo180766 PACid_15415621 17.2.3 hormone... 0.03 Gene family
Smo270369 PACid_15419595 17.2.3 hormone... 0.04 Gene family
Solyc09g097960.3.1 Solyc09g097960.3 17.2.3 hormone... 0.03 Gene family
Zm00001d006365 No alias 17.2.3 hormone... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 21 314
No external refs found!