1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g11230

Len_g11230


Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11230

Target Alias Description ECC score Gene Family Method Actions
Ala_g13747 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16617 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51849.t1 CAMTA3, SR1,... CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72268.t1 Aspi01Gene72268 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06503 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os07g30774.1 LOC_Os07g30774 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
Lfl_g12851 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g01380 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 894 913
IPR000048 IQ_motif_EF-hand-BS 872 889
IPR005559 CG-1_dom 20 133
IPR002110 Ankyrin_rpt 666 752
No external refs found!